PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31429
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 199aa    MW: 22078.9 Da    PI: 6.5495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31429genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1780130255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr....krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +gr+ AeIrd      +    kr +lg+f+taeeAa +++ a+ kl+g
  PEQU_31429  80 RFRGVRQRP-WGRFSAEIRD------SlvleKRLWLGTFDTAEEAASMYDLAAVKLKG 130
                 79*******.**********......33346**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381236.1E-442199IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000187.38E-2679139No hitNo description
SuperFamilySSF541714.58E-2080139IPR016177DNA-binding domain
SMARTSM003803.9E-3180144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-2780138IPR001471AP2/ERF domain
PROSITE profilePS5103222.02380138IPR001471AP2/ERF domain
PfamPF008472.0E-1080130IPR001471AP2/ERF domain
PRINTSPR003671.3E-98192IPR001471AP2/ERF domain
PRINTSPR003671.3E-9104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MMVIAPRSSP LRILHIFFTD ADATESSSEE ELDSAARRRH KKRQKFEISF DGPVAVLDNP  60
ASKRSTMQQP SAAPGCDRKR FRGVRQRPWG RFSAEIRDSL VLEKRLWLGT FDTAEEAASM  120
YDLAAVKLKG DKAVTNFPIK KKDKSEDGVT VGVRSAEFVG GGKTSPTSVI GYGEDELGFD  180
DCLVYGDVDA FGFRVDDMF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2079140465ATERF1
3gcc_A1e-2079140465ATERF1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13543ARRRHKKRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015874690.18e-40PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.15e-27cytokinin response factor 4